build: fix version checks in configure.py

Fixes: https://github.com/nodejs/node/issues/29927
Refs: https://github.com/nodejs/node/pull/29931

PR-URL: https://github.com/nodejs/node/pull/29965


Reviewed-By: Richard Lau <riclau@uk.ibm.com>
Reviewed-By: David Carlier <devnexen@gmail.com>
Reviewed-By: Luigi Pinca <luigipinca@gmail.com>
Reviewed-By: Ben Noordhuis <info@bnoordhuis.nl>