src: move public C++ APIs into src/api/*.cc

This patch moves most of the public C++ APIs into src/api/*.cc
so that it's easier to tell that we need to be careful about
the compatibility of these code.

Some APIs, like `node::LoadEnvironmet()`, `node::Start()` and
`node::Init()` still stay in `node.cc` because they are still
very specific to our use cases and do not work quite well yet
for embedders anyway - we could not even manage to write cctest for
them at the moment.

PR-URL: https://github.com/nodejs/node/pull/25541


Reviewed-By: Gus Caplan <me@gus.host>