[Driver] Fix duplicate -L after D150013

D150013 is to render -L for AMDGPU but updating tools::AddLinkerInputs is wrong
and causes many non-isCrossCompiling targets to have duplicate -L options
because they do `Args.AddAllArgs(CmdArgs, options::OPT_L);`.

Revert the change and add a `Args.AddAllArgs(CmdArgs, options::OPT_L);` instead.