ShortRead

Base classes and methods for high-throughput short-read sequencing data.

Base classes, functions, and methods for representation of high-throughput, short-read sequencing data.

Author Martin Morgan, Michael Lawrence, Simon Anders
Maintainer Biocore Team c/o BioC user list

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ShortRead")

Documentation

Package Downloads
An introduction to ShortRead
ShortRead_and_HilbertCurveDisplay.pdf
Reference Manual
Package source ShortRead_1.0.7.tar.gz
Windows binary ShortRead_1.0.7.zip
MacOS X 10.4 (Tiger) binary ShortRead_1.0.7.tgz
MacOS X 10.5 (Leopard) binary ShortRead_1.0.7.tgz
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Details

biocViews
Infrastructure
Depends
methods , IRanges , Biostrings , Biobase , lattice
Imports
IRanges , Biostrings , Biobase
Suggests
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog