{"name":"abyss","full_name":"abyss","tap":"homebrew/core","oldnames":[],"aliases":[],"versioned_formulae":[],"desc":"Genome sequence assembler for short reads","license":"GPL-3.0-only AND LGPL-2.1-or-later AND MIT AND BSD-3-Clause","homepage":"https://www.bcgsc.ca/resources/software/abyss","versions":{"stable":"2.3.10","head":"HEAD","bottle":true},"urls":{"stable":{"url":"https://github.com/bcgsc/abyss/releases/download/2.3.10/abyss-2.3.10.tar.gz","tag":null,"revision":null,"using":null,"checksum":"bbe42e00d1ebb53ec6afaad07779baaaee994aa5c65b9a38cf4ad2011bb93c65"},"head":{"url":"https://github.com/bcgsc/abyss.git","branch":"master","using":null}},"patches":[],"revision":1,"version_scheme":0,"compatibility_version":null,"autobump":true,"no_autobump_message":null,"skip_livecheck":false,"bottle":{"stable":{"rebuild":0,"root_url":"https://ghcr.io/v2/homebrew/core","files":{"arm64_tahoe":{"cellar":":any","url":"https://ghcr.io/v2/homebrew/core/abyss/blobs/sha256:274f0f758f4cc8852779e2a55f8900ea34ccf7dd0e784396752f03c7e6c56767","sha256":"274f0f758f4cc8852779e2a55f8900ea34ccf7dd0e784396752f03c7e6c56767"},"arm64_sequoia":{"cellar":":any","url":"https://ghcr.io/v2/homebrew/core/abyss/blobs/sha256:156d580ae0392d7045dd60c744d4a1a32206a950c86588cb25aa600dedd0e8ae","sha256":"156d580ae0392d7045dd60c744d4a1a32206a950c86588cb25aa600dedd0e8ae"},"arm64_sonoma":{"cellar":":any","url":"https://ghcr.io/v2/homebrew/core/abyss/blobs/sha256:61982df06da982cf2f7edca391a61f935cb3c1542d165f1ed69f60a33b4a6031","sha256":"61982df06da982cf2f7edca391a61f935cb3c1542d165f1ed69f60a33b4a6031"},"sonoma":{"cellar":":any","url":"https://ghcr.io/v2/homebrew/core/abyss/blobs/sha256:cd3d743d197a92d98b4cd43a45615de53d5cc403a36ac9e41cdf6e47ce7aee44","sha256":"cd3d743d197a92d98b4cd43a45615de53d5cc403a36ac9e41cdf6e47ce7aee44"},"arm64_linux":{"cellar":":any_skip_relocation","url":"https://ghcr.io/v2/homebrew/core/abyss/blobs/sha256:57e42e8b368589c943fa3bd23e3c8f8a5af03b307530c445309dc45a72e2d2d8","sha256":"57e42e8b368589c943fa3bd23e3c8f8a5af03b307530c445309dc45a72e2d2d8"},"x86_64_linux":{"cellar":":any_skip_relocation","url":"https://ghcr.io/v2/homebrew/core/abyss/blobs/sha256:e7b36e68d3d7b88d89656707fd50185e8649d31bac5359575f160dc875c1d28f","sha256":"e7b36e68d3d7b88d89656707fd50185e8649d31bac5359575f160dc875c1d28f"}}}},"pour_bottle_only_if":null,"keg_only":false,"keg_only_reason":null,"options":[],"build_dependencies":["boost","google-sparsehash"],"dependencies":["btllib","open-mpi","libomp"],"test_dependencies":[],"recommended_dependencies":[],"optional_dependencies":[],"uses_from_macos":["sqlite"],"uses_from_macos_bounds":[{}],"requirements":[],"conflicts_with":[],"conflicts_with_reasons":[],"link_overwrite":[],"caveats":null,"installed":[],"linked_keg":null,"pinned":false,"outdated":false,"deprecated":false,"deprecation_date":null,"deprecation_reason":null,"deprecation_replacement_formula":null,"deprecation_replacement_cask":null,"deprecate_args":null,"disabled":false,"disable_date":null,"disable_reason":null,"disable_replacement_formula":null,"disable_replacement_cask":null,"disable_args":null,"post_install_steps":[],"post_install_defined":false,"service":null,"tap_git_head":"2e84f2ff6500f17d1e5246bc35f5b83349fa0e7e","ruby_source_path":"Formula/a/abyss.rb","ruby_source_checksum":{"sha256":"791099f953d27ad0a874db346a46e7dc401ebb2c95d773c89e5a351e90e2e025"},"head_dependencies":{"build_dependencies":["autoconf","automake","multimarkdown","boost","google-sparsehash"],"dependencies":["btllib","open-mpi","libomp"],"test_dependencies":[],"recommended_dependencies":[],"optional_dependencies":[],"uses_from_macos":["sqlite"],"uses_from_macos_bounds":[{}]},"variations":{"x86_64_linux":{"dependencies":["btllib","open-mpi"],"head_dependencies":{"build_dependencies":["autoconf","automake","multimarkdown","boost","google-sparsehash"],"dependencies":["btllib","open-mpi"],"test_dependencies":[],"recommended_dependencies":[],"optional_dependencies":[],"uses_from_macos":["sqlite"],"uses_from_macos_bounds":[{}]}},"arm64_linux":{"dependencies":["btllib","open-mpi"],"head_dependencies":{"build_dependencies":["autoconf","automake","multimarkdown","boost","google-sparsehash"],"dependencies":["btllib","open-mpi"],"test_dependencies":[],"recommended_dependencies":[],"optional_dependencies":[],"uses_from_macos":["sqlite"],"uses_from_macos_bounds":[{}]}}},"executables":["ABYSS","ABYSS-P","AdjList","Consensus","DAssembler","DistanceEst","DistanceEst-ssq","KAligner","MergeContigs","MergePaths","Overlap","ParseAligns","PathConsensus","PathOverlap","PopBubbles","SimpleGraph","abyss-align","abyss-bloom","abyss-bloom-dbg","abyss-bloom-dist.mk","abyss-bowtie","abyss-bowtie2","abyss-bwa","abyss-bwamem","abyss-bwasw","abyss-db-csv","abyss-db-txt","abyss-dida","abyss-fac","abyss-fatoagp","abyss-filtergraph","abyss-fixmate","abyss-fixmate-ssq","abyss-gapfill","abyss-gc","abyss-index","abyss-junction","abyss-kaligner","abyss-layout","abyss-longseqdist","abyss-map","abyss-map-ssq","abyss-mergepairs","abyss-overlap","abyss-paired-dbg","abyss-paired-dbg-mpi","abyss-pe","abyss-rresolver-short","abyss-samtoafg","abyss-scaffold","abyss-sealer","abyss-stack-size","abyss-tabtomd","abyss-todot","abyss-tofastq","konnector","logcounter"],"analytics":{"install":{"30d":{"abyss":57},"90d":{"abyss":94},"365d":{"abyss":318}},"install_on_request":{"30d":{"abyss":57},"90d":{"abyss":94},"365d":{"abyss":309}},"build_error":{"30d":{"abyss":0}}},
"generated_date":"2026-06-07"}
