Package: affy
Version: 1.6.7
Date: 2005-04-25
Title: Methods for Affymetrix Oligonucleotide Arrays 
Author: Rafael A. Irizarry <rafa@jhu.edu>, Laurent Gautier <laurent@cbs.dtu.dk>, Benjamin Milo Bolstad <bolstad@stat.Berkeley.EDU>, and Crispin Miller <cmiller@picr.man.ac.uk>	
	with contributions from
	Magnus Astrand <Magnus.Astrand@astrazeneca.com>,	
	Leslie M. Cope <cope@mts.jhu.edu>, 	
	Robert Gentleman,	
	Jeff Gentry,
	Conrad Halling <challing@agilixcorp.com>,
	Wolfgang Huber,
	James MacDonald <jmacdon@med.umich.edu>,	
	Benjamin I. P. Rubinstein,	
	Christopher Workman <workman@cbs.dtu.dk>,	
	John Zhang	
Maintainer: Rafael A. Irizarry <rafa@jhu.edu>
Depends: R (>= 2.0.1), Biobase (>= 1.5.0), reposTools
Suggests: tkWidgets (>= 1.2.2), affydata
Description: The package contains functions for exploratory oligonucleotide array analysis. The dependance to tkWidgets only concerns few convenience functions. 'affy' is fully functional without it.
License: LGPL version 2 or newer
Collate: ProgressBarText.R ppset.ttest.R ppsetApply.R expressoWidget.R getCDFenv.R AffyRNAdeg.R avdiff.R barplot.ProbeSet.R bg.Affy.chipwide.R bg.R expresso.R fit.li.wong.R generateExprVal.method.avgdiff.R generateExprVal.method.liwong.R generateExprVal.method.mas.R generateExprVal.method.medianpolish.R generateExprVal.method.playerout.R hlog.R justrma.R loess.normalize.R maffy.R mas5.R merge.AffyBatch.R  normalize.constant.R normalize.contrasts.R normalize.invariantset.R normalize.loess.R normalize.qspline.R normalize.quantiles.R pairs.AffyBatch.R plot.density.R plotLocation.R plot.ProbeSet.R pmcorrect.mas.R AffyBatch.R mva.pairs.R ProbeSet.R read.affybatch.R rma.R summary.R tukey.biweight.R whatcdf.R xy2indices.R zzz.R
Packaged: Wed May 18 19:07:14 2005; biocbuild
