rama

Robust Analysis of MicroArrays

Robust estimation of cDNA microarray intensities with replicates. The package uses a Bayesian hierarchical model for the robust estimation. Outliers are modeled explicitly using a t-distribution, and the model also addresses classical issues such as design effects, normalization, transformation, and nonconstant variance.

Author Raphael Gottardo
Maintainer Raphael Gottardo

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("rama")

Documentation

rama Tutorial PDF R Script
Reference Manual

Details

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License GPL version 2 or newer
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Development History Bioconductor Changelog

Package Downloads

Package source rama_1.18.0.tar.gz
Windows binary rama_1.18.0.zip
MacOS X 10.4 (Tiger) binary rama_1.18.0.tgz
MacOS X 10.5 (Leopard) binary rama_1.18.0.tgz
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