copa

Functions to perform cancer outlier profile analysis.

COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.

Author James W. MacDonald
Maintainer James W. MacDonald

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("copa")

Documentation

copa Overview PDF R Script
Reference Manual

Details

biocViews
Depends
Biobase , methods
Imports
Suggests
System Requirements
License Artistic
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog

Package Downloads

Package source copa_1.12.0.tar.gz
Windows binary copa_1.12.0.zip
MacOS X 10.4 (Tiger) binary copa_1.12.0.tgz
MacOS X 10.5 (Leopard) binary copa_1.12.0.tgz
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