arrayMvout

multivariate outlier detection for expression array QA

This package supports the application of diverse quality metrics to AffyBatch instances, summarizing these metrics via PCA, and then performing parametric outlier detection on the PCs to identify aberrant arrays with a fixed Type I error rate

Author Z. Gao, A. Asare, R. Wang, V. Carey
Maintainer V. Carey

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("arrayMvout")

Documentation

Package Downloads

arrayMvout-asdad.pdf
arrayMvout-lkadas.pdf
arrayMvout-lkda.pdf
arrayMvout -- multivariate outlier algorithm for expression arrays
Reference Manual
Package source arrayMvout_1.0.0.tar.gz
Windows binary arrayMvout_1.0.0.zip
MacOS X 10.4 (Tiger) binary arrayMvout_1.0.0.tgz
MacOS X 10.5 (Leopard) binary arrayMvout_1.0.0.tgz
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Details

biocViews
Depends
R , tools , methods , utils , parody , Biobase , affy , lumi
Imports
Suggests
System Requirements
License The Artistic License, Version 2.0
URL
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Development History Bioconductor Changelog