Apoptosis and MAP-Kinase example data {facsDorit} | R Documentation

## FACS data for cell-based apoptosis assay

### Description

Set of FCS 3.0 files containing FACS data for each well of a 96 well microtitre plate

### Format

`map` and `apoptosis` are directories, each containing 96 FCS 3.0 files derived from a FACS experiment to characterize effectors of the MAP-Kinase and apoptotic pathways, respectively. The files may be imported using function `readFCS` (for single files) or function `readCytoSet` (for all files in the directory).

### Source

Mamatha Sauermann (apoptosis), Meher Majety (MAP-Kinase), both at DKFZ Heidelberg

### References

### See Also

`readFCS`, `readCytoSet`

### Examples

    apo <- readFCS(system.file("extdata", "apoptosis",
               "test2933T3.A01", package="facsDorit"))
    apo
    exprs(apo[1:3,])
    description(apo)[3:6]

    map <- readFCS(system.file("extdata", "map",
               "060304MAPK controls.A01", package="facsDorit"))
    map
    exprs(map[1:3,])
    description(map)[3:6]

[Package facsDorit version 1.1.1 Index]