maDB
Microarray database and utility functions for microarray data
analysis.
maDB allows to create a simple microarray database to
store microarray experiments and annotation data into it.
Affymetrix GeneChip expression values as well as values from
two color microarrays can be stored into the database. Whole
experiments or subsets from a experiment (or also values for a
subset of genes in a subset of microarrays) can be fetched back
to R. Additionally maDB provides different utility functions
for the microarray data analysis like functions to draw MA
plots or volcano plots with the data points color coded
according to the local point density or functions that allow a
replicate handling of miroarrays.
| Author |
Johannes Rainer |
| Maintainer |
Johannes Rainer |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("maDB")
Documentation
Details
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| License |
LGPL version 2 or newer |
| URL |
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| Development History |
Bioconductor Changelog
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Package Downloads