Bioconductor Task View: Classification

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Package Maintainer Title
bgafun Iain Wallace BGAfun A method to identify specifity determining residues in protein families
CMA Martin Slawski Synthesis of microarray-based classification
ctc Antoine Lucas Cluster and Tree Conversion.
gaga David Rossell GaGa hierarchical model for microarray data analysis
gene2pathway Holger Froehlich Prediction of KEGG pathway membership for individual genes based on InterPro domain signatures
gpls Biocore Team c/o BioC user list Classification using generalized partial least squares
iterativeBMA Ka Yee Yeung The Iterative Bayesian Model Averaging (BMA) algorithm
logicFS Holger Schwender Identification of SNP Interactions
made4 Aedin Culhane Multivariate analysis of microarray data using ADE4
maigesPack Gustavo H. Esteves Functions to handle cDNA microarray data, including several methods of data analysis
MCRestimate Marc Johannes Misclassification error estimation with cross-validation
MiPP Sukwoo Kim Misclassification Penalized Posterior Classification
MLInterfaces V. Carey Uniform interfaces to R machine learning procedures for data in Bioconductor containers
pamr Rob Tibshirani Pam: prediction analysis for microarrays
pdmclass James W. MacDonald Classification of Microarray Samples using Penalized Discriminant Methods
rHVDM Martino Barenco Hidden Variable Dynamic Modeling
Rmagpie Camille Maumet MicroArray Gene-expression-based Program In Error rate estimation
stam Claudio Lottaz Structured Analysis of Microarray Data
vbmp Nicola Lama Variational Bayesian Multinomial Probit Regression