plier

Implements the Affymetrix PLIER algorithm

The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.

Author Affymetrix Inc., Crispin J Miller, PICR
Maintainer Crispin Miller

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("plier")

Documentation

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Reference Manual
Package source plier_1.12.0.tar.gz
Windows binary plier_1.12.0.zip
MacOS X 10.4 (Tiger) binary plier_1.12.0.tgz
MacOS X 10.5 (Leopard) binary plier_1.12.0.tgz
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Details

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Depends
R , affy , methods
Imports
Suggests
System Requirements
License GPL version 2 or later
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Development History Bioconductor Changelog