AffyCompatible

Affymetrix GeneChip software compatibility

This package provides an interface to Affymetrix chip annotation and sample attribute files. The package allows an easy way for users to download and manage local data bases of Affynmetrix NetAffx annotation files. The package also provides access to GeneChip Operating System (GCOS) and GeneChip Command Console (AGCC)-compatible sample annotation files.

Author Martin Morgan , Robert Gentleman
Maintainer Martin Morgan

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("AffyCompatible")

Documentation

Package Downloads

Retrieving MAGE and ARR sample attributes
Annotation retrieval with NetAffxResource
Reference Manual
Package source AffyCompatible_1.2.0.tar.gz
Windows binary AffyCompatible_1.2.0.zip
MacOS X 10.4 (Tiger) binary AffyCompatible_1.2.0.tgz
MacOS X 10.5 (Leopard) binary AffyCompatible_1.2.0.tgz
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Details

biocViews
Depends
R , XML , RCurl , methods
Imports
Suggests
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog