cosmoGUI

GUI for constructing constraint sets used by the cosmo package

cosmoGUI allows the user to interactively define constraint sets that can be used by the cosmo package to supervise the search for shared motifs in a set of DNA sequences. The constraints can be either adapted from a set of commonly used templates or defined from scratch.

Author Fabian Gallusser, Oliver Bembom, and Sandrine Dudoit
Maintainer Oliver Bembom

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("cosmoGUI")

Vignettes (Documentation)

Package Downloads

No vignettes available
Source cosmoGUI_1.6.0.tar.gz
Windows binary cosmoGUI_1.6.0.zip
OS X binary cosmoGUI_1.6.0.tgz

Details

biocViews
Depends tkWidgets, cosmo
Suggests
Imports
SystemRequirements
License LGPL version 2 or newer
URL http://cosmoweb.berkeley.edu/intro.html, http://www.bepress.com/ucbbiostat/paper209/
dependsOnMe
suggestsMe cosmo