adSplit

Annotation-Driven Clustering

This package implements clustering of microarray gene expression profiles according to functional annotations. For each term genes are annotated to, splits into two subclasses are computed and a significance of the supporting gene set is determined.

Author Claudio Lottaz, Joern Toedling
Maintainer Claudio Lottaz

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("adSplit")

Vignettes (Documentation)

Package Downloads

bcb_logo.pdf
minerva_bcb.pdf
tr_2005_02.pdf
Source adSplit_1.10.0.tar.gz
Windows binary adSplit_1.10.0.zip
OS X binary adSplit_1.10.0.tgz

Details

biocViews
Depends R, methods, graphics, stats, cluster, multtest, Biobase, affy, GO, KEGG
Suggests golubEsets, vsn, hu6800
Imports
SystemRequirements
License GPL (>= 2)
URL http://compdiag.molgen.mpg.de/software/index.shtml
dependsOnMe
suggestsMe