spotSegmentation

Microarray Spot Segmentation and Gridding for Blocks of Microarray Spots

Spot segmentation via model-based clustering and gridding for blocks within microarray slides, as described in Li et al, Robust Model-Based Segmentation of Microarray Images, Technical Report no. 473, Department of Statistics, University of Washington.

Author Qunhua Li, Chris Fraley, Adrian Raftery Department of Statistics, University of Washington
Maintainer Chris Fraley

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("spotSegmentation")

Vignettes (Documentation)

Package Downloads

spotsegdoc.pdf
Source spotSegmentation_1.12.0.tar.gz
Windows binary spotSegmentation_1.12.0.zip
OS X binary spotSegmentation_1.12.0.tgz

Details

biocViews
Depends R, mclust
Suggests
Imports
SystemRequirements
License GPL version 2 or higher
URL http://www.stat.washington.edu/fraley
dependsOnMe
suggestsMe