cosmoGUI allows the user to interactively define constraint sets that can be used by the cosmo package to supervise the search for shared motifs in a set of DNA sequences. The constraints can be either adapted from a set of commonly used templates or defined from scratch.
| Author | Fabian Gallusser, Oliver Bembom, and Sandrine Dudoit |
| Maintainer | Oliver Bembom |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("cosmoGUI")
Vignettes (Documentation) |
Package Downloads |
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| biocViews | |
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| Depends | tkWidgets, cosmo |
| Suggests | |
| Imports | |
| SystemRequirements | |
| License | LGPL version 2 or newer |
| URL | http://cosmoweb.berkeley.edu/intro.html, http://www.bepress.com/ucbbiostat/paper209/ |
| dependsOnMe | |
| suggestsMe | cosmo |