EBImage

Image processing and image analysis toolkit for R

The package provides functionality to perform image processing and image analysis in R. Originally designed to support automated image analysis in high throughput cell-based microscopy assays, the package is of general natuare and can be used for other image analysis problems. The package supports over 95 image formats through its interface to ImageMagick and provides an extensive set of functions for image manipulation and feature extraction on single images and image stacks. The package also features some GUI options providing a built-in image viewer and an image selection dialog.

Author	Oleg Sklyar, Wolfgang Huber, Mike Smith
Maintainer	Oleg Sklyar

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("EBImage")

Vignettes (Documentation)

Package Downloads

AnalysisWithEBImage.pdf

EBImageInstallHOWTO.pdf

Source	EBImage_2.2.0.tar.gz
Windows binary	EBImage_2.2.0.zip
OS X binary	EBImage_2.2.0.tgz

Details

biocViews	Visualization
Depends	R, methods, graphics, utils
Suggests
Imports
SystemRequirements	ImageMagick (>= 6.2.4), GTK+ (> 2.6) -- Windows dependencies are available from the URL below! See package vignette for installation instructions.
License	LGPL
URL	http://www.ebi.ac.uk/~osklyar/EBImage/
dependsOnMe
suggestsMe