aCGH

Classes and functions for Array Comparative Genomic Hybridization data.

Functions for reading aCGH data from image analysis output files and clone information files, creation of aCGH S3 objects for storing these data. Basic methods for accessing/replacing, subsetting, printing and plotting aCGH objects.

Author Jane Fridlyand , Peter Dimitrov
Maintainer Jane Fridlyand

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("aCGH")

Vignettes (Documentation)

Package Downloads

aCGH.pdf
Source aCGH_1.10.0.tar.gz
Windows binary aCGH_1.10.0.zip
OS X binary aCGH_1.10.0.tgz

Details

biocViews
Depends R, cluster, survival, multtest, sma
Suggests
Imports
SystemRequirements
License GPL
URL
dependsOnMe snapCGH
suggestsMe beadarraySNP