Bioconductor Task View: Infrastructure

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Package Maintainer Title
Biobase Biocore Team Biobase: Base functions for Bioconductor
biocViews Seth Falcon Categorized views of R package repositories
BioMVCClass Elizabeth Whalen Model-View-Controller (MVC) Classes That Use Biobase
Biostrings H. Pages String objects representing biological sequences, and matching algorithms
BSgenome H. Pages Infrastructure for Biostrings-based genome data packages
BufferedMatrix Benjamin Milo Bolstad A matrix data storage object held in temporary files
BufferedMatrixMethods B. M. Bolstad Microarray Data related methods that utlize BufferedMatrix objects
convert Yee Hwa (Jean) Yang Convert Microarray Data Objects
flowCore Nolwenn Le Meur flowCore: Basic structures for flow cytometry data
flowViz Florian Hahne Visualization for flow cytometry
GeneSpring Thon de Boer GeneSpring R Integration Functions
GeneTraffic Daniel Iordan GeneTraffic R Integration Functions
hypergraph Seth Falcon A package providing hypergraph data structures
MVCClass Elizabeth Whalen Model-View-Controller (MVC) Classes
ontoTools Vince Carey graphs and sparse matrices for working with ontologies; formal objects for nomenclatures with provenance management
pdInfoBuilder Seth Falcon Platform Design Information Package Builder
pgUtils Johannes Rainer Utility functions for PostgreSQL databases
pkgDepTools Seth Falcon Package Dependency Tools
Rdbi Jianhua Zhang Generic database methods
RdbiPgSQL Jianhua Zhang PostgreSQL access
rflowcyt N. LeMeur Statistical tools and data structures for analytic flow cytometry
Rredland VJ Carey interface to redland RDF utilities
Ruuid Biocore Team Ruuid: Provides Universally Unique ID values
RWebServices Biocore Team Expose R functions as web services through Java/Axis/Apache
splicegear Laurent splicegear
tkWidgets J. Zhang R based tk widgets
TypeInfo Duncan Temple Lang Optional Type Specification Prototype
weaver Seth Falcon Tools and extensions for processing Sweave documents
webbioc Colin A. Smith Bioconductor Web Interface
widgetTools Jianhua Zhang Creates an interactive tcltk widget