R-based access to mass-spectrometry (MS) data. While many packages exist to process MS data, many of these make it difficult to access the underlying mass-to-charge ratio (m/z), intensity, and retention time of the files themselves. This package is designed to format MS data in a tidy fashion and allows the user perform the plotting and analysis.
| Version: | 1.4.3 |
| Imports: | xml2, base64enc, data.table, utils, stats |
| Suggests: | testthat, knitr, rmarkdown, tidyverse, ggplot2, dplyr, plotly, openxlsx, DBI, RSQLite, reticulate, BiocParallel, Spectra, arrow, microbenchmark, rvest |
| Published: | 2024-10-09 |
| DOI: | 10.32614/CRAN.package.RaMS |
| Author: | William Kumler [aut, cre, cph], Ricardo Cunha [ctb], Ethan Bass [ctb] |
| Maintainer: | William Kumler <wkumler at uw.edu> |
| BugReports: | https://github.com/wkumler/RaMS/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/wkumler/RaMS |
| NeedsCompilation: | no |
| Citation: | RaMS citation info |
| Materials: | README NEWS |
| In views: | ChemPhys |
| CRAN checks: | RaMS results |
| Reference manual: | RaMS.pdf |
| Vignettes: |
Intro-to-RaMS (source, R code) Intro-to-tmzML (source, R code) Minifying-files-with-RaMS (source, R code) RaMS-and-friends (source, R code) Benchmarking (source, R code) |
| Package source: | RaMS_1.4.3.tar.gz |
| Windows binaries: | r-devel: RaMS_1.4.3.zip, r-release: RaMS_1.4.3.zip, r-oldrel: RaMS_1.4.3.zip |
| macOS binaries: | r-release (arm64): RaMS_1.4.3.tgz, r-oldrel (arm64): RaMS_1.4.3.tgz, r-release (x86_64): RaMS_1.4.3.tgz, r-oldrel (x86_64): RaMS_1.4.3.tgz |
| Old sources: | RaMS archive |
| Reverse imports: | RawHummus, squallms |
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