# Joint Mapping for Quantitative Trait Loci

## Documentation for package ‘JM4QTN’ version 1.0.0

- DESCRIPTION file.

## Help Pages

JM4QTN-package | Joint Mapping for QTN
calculate_expected_genotype_distribution | Expected Allele Genotype Distribution Calculator
calculate_genotype_frequencies | Genotype Frequency Calculator for Genetic Populations
expected_genotype_dist | Expected Allele Genotype Distribution Calculator
GeneticMap | Data about genetic map
GenoData | Data about molecular markers genotype
GenoData_EST | Data about information of molecular markers chromosome id, genetic distance position and genotype with estimated missing markers
GenoData_S2 | Data about information of molecular markers chromosome id, genetic distance position and estimated missing markers genotype with steps = 2
genotype_freq | Genotype Frequency Calculator for Genetic Populations
genotype_prob | Calculate Genotype Probabilities and Impute Missing Data
haldane_map | Haldane Mapping Function
haldane_mapping_function | Haldane Mapping Function
JM4QTN | Joint Mapping for QTN
joint_map | Joint Mapping Analysis for Multiple Traits
permutation_test | Permutation Test for Stepwise Regression
PhenoData | Data about all phenotype
pheno_stats | Statistical Analysis of Phenotype Data
skeletion_build | Fit the stepwise “skeleton” model for joint mapping
skeleton_build | Fit the stepwise “skeleton” model for joint mapping