Package: RapidoPGS
Title: A Fast and Light Package to Compute Polygenic Risk Scores
Version: 2.2.0
Authors@R: c(
    person("Guillermo","Reales", role = c("aut", "cre"), email = "gr440@cam.ac.uk",  comment = c(ORCID = "0000-0001-9993-3916")),
    person("Chris", "Wallace", role = "aut", email = "cew54@cam.ac.uk", comment = c(ORCID = "0000-0001-9755-1703")),
    person("Olly", "Burren", role = "ctb", email = "ob219@cam.ac.uk", comment = c(ORCID = "0000-0002-3388-5760")))
Description: Quickly computes polygenic scores from GWAS summary statistics of either case-control or quantitative traits, without LD matrix computation or parameter tuning. Reales,G., Vigorito, E., Kelemen,M., Wallace,C. (2021) <doi:10.1101/2020.07.24.220392> "RápidoPGS: A rapid polygenic score calculator for summary GWAS data without a test dataset".
License: GPL-3
Depends: R (>= 4.0), data.table, RCurl, curl
Imports: dplyr (>= 1.0.6), GenomicRanges (>= 1.42.0), IRanges (>=
        2.24.1), bigsnpr (>= 1.8.1), coloc (>= 5.1.0), bigreadr (>=
        0.2.4)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2022-06-15 12:38:35 UTC; guille
Author: Guillermo Reales [aut, cre] (<https://orcid.org/0000-0001-9993-3916>),
  Chris Wallace [aut] (<https://orcid.org/0000-0001-9755-1703>),
  Olly Burren [ctb] (<https://orcid.org/0000-0002-3388-5760>)
Maintainer: Guillermo Reales <gr440@cam.ac.uk>
Repository: CRAN
Date/Publication: 2022-06-15 13:40:05 UTC
Built: R 4.1.3; ; 2023-04-17 19:23:53 UTC; windows
