Package: PO.EN
Type: Package
Title: An Elastic-Net Regularized Presence-Only Model
Version: 1.0
Date: 2020-07-22
Authors@R: c(person("Zikun","Yang", email="yangzikun1125@gmail.com",role=c("aut", "cre", "cph")), 
             person("Chen","Wang", role="ctb"), 
             person("Iuliana","Ionita-Laza", role=c("aut","ctb")))
Maintainer: Zikun Yang <yangzikun1125@gmail.com>
Description: Presence-only model with Elastic Net penalty is a regularized generalized linear model training on the presence-absence response. This package provides functions for tuning and fitting the presence-only model. The presence-only model can be used to predict regulatory effects of genetic variants at sequence-level resolution by integrating a large number of epigenetic features and massively parallel reporter assays (MPRAs). 
Depends: R (>= 3.1.0)
License: GPL (>= 2)
Encoding: UTF-8
Imports: Rcpp, PUlasso, glmnet, pROC
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.1.0.9000
NeedsCompilation: yes
Packaged: 2020-08-11 18:33:43 UTC; zikunyang
Author: Zikun Yang [aut, cre, cph],
  Chen Wang [ctb],
  Iuliana Ionita-Laza [aut, ctb]
Repository: CRAN
Date/Publication: 2020-08-19 08:40:05 UTC
Built: R 4.0.5; x86_64-w64-mingw32; 2022-04-21 11:35:10 UTC; windows
Archs: i386, x64
