
### Co-occurence of Mutated Genes
``` {r somatic-interactions, fig.width=12, fig.height=6 , output=FALSE}
pval_low=0.05
pval_high=0.01

#source("~/Documents/helper_functions/helper_functions.oncoplot.R")
generateRibbonPlot(maf,
                   plot_type="matrix",
                   pval_low = pval_low, pval_high = pval_high, 
                   gene_colors = "grey50",
                   shrink_factor=1.5)
# if(!is.null(dev.list()))
# {
#   dev.off() 
# }
```
