Package: LDheatmap
Version: 1.0-4
Date: 2020-10-03
Title: Graphical Display of Pairwise Linkage Disequilibria Between SNPs
Authors@R: c(person("Ji-Hyung","Shin",email="shin@sfu.ca", role="aut"),
             person("Sigal","Blay", email="sblay@sfu.ca",role="aut"),
             person("Nicholas","Lewin-Koh",email="nikko@hailmail.net", role="ctb"),
             person("Brad","McNeney",email="mcneney@sfu.ca",role=c("aut","cre")),
             person("Gloria","Yang",email="xuefei_yang@sfu.ca",role="ctb"),
             person("Matthew","Reyers",email="matthew_reyers@sfu.ca",role="ctb"),
             person("Youwei","Yan",email="youweiy@sfu.ca",role="ctb"), 
             person("Jinko","Graham",email="jgraham@sfu.ca",role="aut"))
Maintainer: Brad McNeney <mcneney@sfu.ca>
Depends: R (>= 4.0)
Imports: grid, genetics, snpStats, Rcpp
Suggests: rtracklayer, GenomicRanges, GenomeInfoDb, IRanges, lattice,
        ggplot2, vcfR
Description: Produces a graphical display, as a heat map, of measures
        of pairwise linkage disequilibria between single nucleotide polymorphisms (SNPs). Users may
        optionally include the physical locations or genetic map
        distances of each SNP on the plot. The methods are described in 
        Shin et al. (2006) <doi:10.18637/jss.v016.c03>. Users should note that the
        imported package 'snpStats' and the suggested packages 
        'rtracklayer', 'GenomicRanges', 'GenomInfoDb' and 'IRanges' are all
        BioConductor packages <https://bioconductor.org>.
License: GPL-3
URL: https://sfustatgen.github.io/LDheatmap/
Repository: CRAN
Date/Publication: 2020-10-08 10:00:02 UTC
RoxygenNote: 7.1.0
LinkingTo: Rcpp
NeedsCompilation: yes
Packaged: 2020-10-03 16:53:57 UTC; mcneney
Author: Ji-Hyung Shin [aut],
  Sigal Blay [aut],
  Nicholas Lewin-Koh [ctb],
  Brad McNeney [aut, cre],
  Gloria Yang [ctb],
  Matthew Reyers [ctb],
  Youwei Yan [ctb],
  Jinko Graham [aut]
Built: R 4.0.5; x86_64-w64-mingw32; 2022-04-21 04:45:31 UTC; windows
Archs: i386, x64
